HL_6S13_111

3D structure

PDB id

6S13 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.58 Å

Loop

Sequence

UUAGCUUCUGCGAAG

Length

15 nucleotides

Bulged bases

6S13|1|A|A|1893, 6S13|1|A|U|1896, 6S13|1|A|U|1897, 6S13|1|A|C|1898, 6S13|1|A|U|1899, 6S13|1|A|A|1904

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S13|1|A|U|1891
6S13|1|A|U|1892
6S13|1|A|A|1893
6S13|1|A|G|1894
6S13|1|A|C|1895
6S13|1|A|U|1896
6S13|1|A|U|1897
6S13|1|A|C|1898
6S13|1|A|U|1899
6S13|1|A|G|1900
6S13|1|A|C|1901
6S13|1|A|G|1902
6S13|1|A|A|1903
6S13|1|A|A|1904
6S13|1|A|G|1905

Current chains

Chain A

23S ribosomal RNA

Nearby chains