HL_6SGC_030

3D structure

PDB id

6SGC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome stalled on a poly(A) tail

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GCCGAAACGAU

Length

11 nucleotides

Bulged bases

6SGC|1|54|C|1768

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SGC|1|54|G|1761
6SGC|1|54|C|1762
6SGC|1|54|C|1763
6SGC|1|54|G|1764
6SGC|1|54|A|1765
6SGC|1|54|A|1766
6SGC|1|54|A|1767
6SGC|1|54|C|1768
6SGC|1|54|G|1769
6SGC|1|54|A|1770
6SGC|1|54|U|1771

Current chains

Chain 54

28S ribosomal RNA

Nearby chains

Chain J2

Ribosomal protein L11

Chain T1

eS13