HL_6SJ6_005

3D structure

PDB id

6SJ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-RsfS complex from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

GAUAUGUGAAUACAUAGCAUAUC

Length

23 nucleotides

Bulged bases

6SJ6|1|A|U|163, 6SJ6|1|A|A|164

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SJ6|1|A|G|153
6SJ6|1|A|A|154
6SJ6|1|A|U|155
6SJ6|1|A|A|156
6SJ6|1|A|U|157
6SJ6|1|A|G|158
6SJ6|1|A|U|159
6SJ6|1|A|G|160
6SJ6|1|A|A|161
6SJ6|1|A|A|162
6SJ6|1|A|U|163
6SJ6|1|A|A|164
6SJ6|1|A|C|165
6SJ6|1|A|A|166
6SJ6|1|A|U|167
6SJ6|1|A|A|168
6SJ6|1|A|G|169
6SJ6|1|A|C|170
6SJ6|1|A|A|171
6SJ6|1|A|U|172
6SJ6|1|A|A|173
6SJ6|1|A|U|174
6SJ6|1|A|C|175

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L28