Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_6SJ6_0011/A/67:74No text annotation
geometric
HL_4WF9_001
HL_86769.4
HL_6SJ6_0021/A/87:95No text annotation
geometric
HL_5TBW_004
NA
HL_6SJ6_0031/A/122:127No text annotation
homologous
HL_4WF9_003
HL_75660.5
HL_6SJ6_0041/A/135:144No text annotation
geometric
HL_5TBW_028
NA
HL_6SJ6_0751/A/155:173No text annotation
HL_6SJ6_0061/A/190:212No text annotation
HL_6SJ6_0651/A/241:262No text annotation
HL_6SJ6_0081/A/249:255No text annotation
homologous
HL_5J7L_141
HL_37369.2
HL_6SJ6_0091/A/283:288No text annotation
HL_6SJ6_0761/A/348:355T-loop with 2 stacked bulged bases
homologous
HL_4WF9_010
HL_01609.3
HL_6SJ6_0111/A/362:366No text annotation
homologous
HL_7RQB_011
NA
HL_6SJ6_0121/A/370:378T-loop with unstacked turn
homologous
HL_5J7L_144
HL_27670.2
HL_6SJ6_0771/A/428:438No text annotation
HL_6SJ6_0141/A/456:463Pseudoknot geometry
homologous
HL_5J7L_146
HL_30680.3
HL_6SJ6_0151/A/508:513GNRA
homologous
HL_4WF9_015
HL_37824.8
HL_6SJ6_0161/A/533:538GNRA
homologous
HL_7RQB_016
NA
HL_6SJ6_0171/A/587:594No text annotation
homologous
HL_4WF9_017
HL_50318.1
HL_6SJ6_0181/A/609:618T-loop with 2 stacked bulged bases
geometric
HL_4WF9_018
HL_28252.9
HL_6SJ6_0191/A/655:661No text annotation
geometric
HL_2ZNI_001
HL_75660.5
HL_6SJ6_0201/A/674:679GNRA
homologous
HL_7RQB_020
NA
HL_6SJ6_0221/A/789:798No text annotation
homologous
HL_4WF9_023
HL_88205.2
HL_6SJ6_0231/A/824:830No text annotation
homologous
HL_5J7L_156
HL_87954.2
HL_6SJ6_0241/A/871:876No text annotation
homologous
HL_7A0S_024
HL_55195.3
HL_6SJ6_0261/A/999:1006GNRA
homologous
HL_7RQB_027
NA
HL_6SJ6_0271/A/1022:1029No text annotation
homologous
HL_5J7L_160
HL_42998.2
HL_6SJ6_0671/A/1214:1218Mini UNCG
geometric
HL_4LFB_005
HL_48778.2
HL_6SJ6_0301/A/1260:1265GNRA
homologous
HL_4WF9_031
HL_37824.8
HL_6SJ6_0311/A/1318:1326T-loop with 2 stacked bulged bases
homologous
HL_4WF9_032
HL_28252.9
HL_6SJ6_0321/A/1361:1367Pseudoknot geometry with 3' bulge
homologous
HL_4WF9_033
HL_57176.2
HL_6SJ6_0331/A/1400:1405GNRA
homologous
HL_7RQB_035
NA
HL_6SJ6_0341/A/1425:1436No text annotation
HL_6SJ6_0361/A/1656:1663No text annotation
homologous
HL_7RQB_040
NA
HL_6SJ6_0371/A/1673:1681GNRA with extra cWW
homologous
HL_4WF9_039
HL_20167.2
HL_6SJ6_0381/A/1735:1740No text annotation
homologous
HL_7RQB_042
NA
HL_6SJ6_0391/A/1760:1769No text annotation
geometric
HL_4WF9_003
HL_75660.5
HL_6SJ6_0401/A/1779:1783No text annotation
homologous
HL_7RQB_044
NA
HL_6SJ6_0411/A/1804:1814No text annotation
homologous
HL_4WF9_043
HL_01962.2
HL_6SJ6_0681/A/1825:1848No text annotation
HL_6SJ6_0421/A/1833:1838GNRA
homologous
HL_7RQB_046
NA
HL_6SJ6_0691/A/1976:1984No text annotation
homologous
HL_5J7L_182
HL_20167.2
HL_6SJ6_0451/A/2054:2063No text annotation
homologous
HL_4WF9_047
HL_61996.3
HL_6SJ6_0481/A/2275:2283No text annotation
homologous
HL_5J7L_186
HL_85367.2
HL_6SJ6_0491/A/2291:2303No text annotation
homologous
HL_4WF9_050
HL_91939.2
HL_6SJ6_0501/A/2350:2359No text annotation
geometric
HL_6JXM_002
HL_31585.4
HL_6SJ6_0511/A/2382:2389GNRA with extra cWW
homologous
HL_4WF9_053
HL_04259.3
HL_6SJ6_0781/A/2401:2406No text annotation
HL_6SJ6_0531/A/2431:2440No text annotation
homologous
HL_7A0S_058
HL_53454.2
HL_6SJ6_0541/A/2498:2506No text annotation
geometric
HL_5TBW_012
NA
HL_6SJ6_0551/A/2554:2563No text annotation
geometric
HL_7RQB_068
NA
HL_6SJ6_0561/A/2578:2584No text annotation
homologous
HL_4WF9_058
HL_30068.2
HL_6SJ6_0571/A/2621:2626GNRA
homologous
HL_5J7L_196
HL_37824.8
HL_6SJ6_0581/A/2685:2690GNRA
homologous
HL_7RQB_064
NA
HL_6SJ6_0591/A/2727:2734No text annotation
HL_6SJ6_0711/A/2764:2794No text annotation
HL_6SJ6_0601/A/2769:2789No text annotation
HL_6SJ6_0721/A/2839:2847No text annotation
homologous
HL_4WF9_064
HL_64690.6
HL_6SJ6_0731/A/2867:2889No text annotation
HL_6SJ6_0621/A/2874:2883No text annotation
geometric
HL_8KAL_008
NA
HL_6SJ6_0741/B/82:90No text annotation
HL_6SJ6_0641/B/83:88No text annotation
geometric
HL_5TBW_002
NA

Problematic loops

#loop idProblemSequence
HL_6SJ6_005No text annotation
HL_6SJ6_007No text annotation
HL_6SJ6_010No text annotation
HL_6SJ6_066No text annotation
HL_6SJ6_013No text annotation
HL_6SJ6_021No text annotation
HL_6SJ6_025No text annotation
HL_6SJ6_028No text annotation
HL_6SJ6_029No text annotation
HL_6SJ6_035No text annotation
HL_6SJ6_043No text annotation
HL_6SJ6_044No text annotation
HL_6SJ6_046No text annotation
HL_6SJ6_047No text annotation
HL_6SJ6_052No text annotation
HL_6SJ6_070No text annotation
HL_6SJ6_061No text annotation
HL_6SJ6_063No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_6SJ6_1141/A/7:9,
1/A/2914:2915
Single stack bend
geometric
IL_5J7L_032
IL_26793.1
IL_6SJ6_0011/A/24:30,
1/A/555:561
Triple sheared with non-canonical cWW
homologous
IL_4WF9_001
IL_04021.2
IL_6SJ6_0021/A/36:37,
1/A/488:490
Single bulged A
homologous
IL_7A0S_002
IL_31462.7
IL_6SJ6_0861/A/42:44,
1/A/480:483
Minor groove platform with extra cWW
homologous
IL_4WF9_003
IL_90351.1
IL_6SJ6_0871/A/56:76,
1/A/109:113
No text annotation
IL_6SJ6_0881/A/81:85,
1/A/97:104
No text annotation
homologous
IL_9DFE_004
IL_01488.3
IL_6SJ6_0051/A/152:153,
1/A/175:177
Major groove platform
geometric
IL_4WF9_078
IL_48076.6
IL_6SJ6_1151/A/186:187,
1/A/215:217
Single stack bend
homologous
IL_5J7L_249
IL_90729.1
IL_6SJ6_0071/A/241:248,
1/A/256:262
8x7 Sarcin-Ricin; G-bulge
homologous
IL_4WF9_009
IL_04346.10
IL_6SJ6_1161/A/305:331,
1/A/395:412
No text annotation
IL_6SJ6_1171/A/336:338,
1/A/386:390
No text annotation
homologous
IL_9DFE_011
IL_69440.3
IL_6SJ6_0091/A/527:530,
1/A/541:554
No text annotation
homologous
IL_4WF9_015
IL_81516.2
IL_6SJ6_0101/A/581:584,
1/A/597:600
Double sheared
homologous
IL_4WF9_016
IL_09705.15
IL_6SJ6_0111/A/607:609,
1/A/618:620
Isolated non-canonical cWW pair
homologous
IL_7A0S_011
IL_07785.1
IL_6SJ6_0121/A/638:640,
1/A/704:707
Isolated non-canonical cWW pair
homologous
IL_4WF9_018
IL_07785.1
IL_6SJ6_0131/A/649:653,
1/A/663:667
AAA cross-strand stack
homologous
IL_4WF9_019
IL_66798.2
IL_6SJ6_0141/A/717:719,
1/A/851:853
Isolated non-canonical cWW pair
geometric
IL_5J7L_259
IL_87907.2
IL_6SJ6_0151/A/719:723,
1/A/844:851
tHW-tHW cross-strand stack
homologous
IL_4WF9_021
IL_54041.2
IL_6SJ6_0161/A/742:743,
1/A/808:810
Single bulged A
homologous
IL_5J7L_261
IL_31462.7
IL_6SJ6_0171/A/746:753,
1/A/768:776
No text annotation
IL_6SJ6_0181/A/783:785,
1/A/802:803
Major groove platform
homologous
IL_4WF9_026
IL_48076.6
IL_6SJ6_0191/A/820:822,
1/A/832:836
Multiple bulged bases
geometric
IL_4V9F_030
IL_57881.1
IL_6SJ6_0201/A/882:883,
1/A/984:986
Single stack bend
homologous
IL_7A0S_022
IL_90729.1
IL_6SJ6_1181/A/888:894,
1/A/974:979
No text annotation
IL_6SJ6_0221/A/897:898,
1/A/969:971
No text annotation
IL_6SJ6_0231/A/901:907,
1/A/960:966
7x7 Sarcin-Ricin with intercalated A; G-bulge
geometric
IL_4WF9_031
IL_29198.2
IL_6SJ6_1191/A/901:908,
1/A/958:966
No text annotation
IL_6SJ6_0241/A/907:909,
1/A/957:960
No text annotation
IL_6SJ6_0251/A/909:915,
1/A/952:957
No text annotation
IL_6SJ6_0261/A/1038:1040,
1/A/1203:1204
Single bulged C
homologous
IL_7RQB_035
NA
IL_6SJ6_0271/A/1042:1046,
1/A/1197:1201
UAA/GAN
homologous
IL_7A0S_033
IL_38507.2
IL_6SJ6_0281/A/1048:1055,
1/A/1194:1195
SSU/LSU pseudoknot
homologous
IL_4WF9_037
IL_41203.4
IL_6SJ6_0291/A/1055:1057,
1/A/1193:1194
Single bulged U
geometric
IL_5J7L_279
IL_89505.4
IL_6SJ6_0971/A/1055:1068,
1/A/1184:1194
No text annotation
IL_6SJ6_0301/A/1061:1068,
1/A/1184:1189
No text annotation
IL_6SJ6_0311/A/1068:1074,
1/A/1168:1184
No text annotation
geometric
IL_4WF9_040
IL_50715.3
IL_6SJ6_0981/A/1068:1086,
1/A/1157:1184
No text annotation
IL_6SJ6_0991/A/1235:1237,
1/A/1285:1288
Isolated cWS basepair
homologous
IL_4WF9_044
IL_42997.3
IL_6SJ6_0331/A/1243:1245,
1/A/1277:1279
Isolated cWH basepair
homologous
IL_4WF9_045
IL_10167.6
IL_6SJ6_0341/A/1246:1253,
1/A/1272:1276
Kink-turn
homologous
IL_5J7L_288
IL_70923.9
IL_6SJ6_0351/A/1257:1259,
1/A/1266:1268
Intercalated cWW
homologous
IL_4WF9_047
IL_31737.3
IL_6SJ6_0361/A/1300:1307,
1/A/2038:2044
8x7 Sarcin-Ricin; G-bulge
homologous
IL_7RQB_049
NA
IL_6SJ6_0371/A/1347:1350,
1/A/1647:1648
Major groove platform; stack outside cWW
homologous
IL_4WF9_049
IL_50694.7
IL_6SJ6_0381/A/1356:1360,
1/A/1368:1370
Major groove minor groove platform with tHH
homologous
IL_4WF9_050
IL_83150.2
IL_6SJ6_0391/A/1388:1392,
1/A/1413:1417
UAA/GAN
homologous
IL_4WF9_051
IL_89021.2
IL_6SJ6_1001/A/1388:1398,
1/A/1407:1417
No text annotation
IL_6SJ6_0401/A/1393:1398,
1/A/1407:1412
No text annotation
geometric
IL_8ZA4_001
IL_76308.6
IL_6SJ6_1201/A/1445:1460,
1/A/1628:1638
No text annotation
IL_6SJ6_1211/A/1461:1466,
1/A/1623:1627
Triple sheared
geometric
IL_1U6B_002
IL_17948.2
IL_6SJ6_1221/A/1695:1700,
1/A/2031:2033
No text annotation
homologous
IL_4WF9_062
IL_12566.4
IL_6SJ6_0431/A/1707:1709,
1/A/2022:2024
Isolated tWW turn
homologous
IL_7A0S_060
IL_67095.2
IL_6SJ6_0441/A/1710:1713,
1/A/2020:2021
Major groove platform; stack outside cWW
homologous
IL_4WF9_064
IL_50694.7
IL_6SJ6_0451/A/1713:1718,
1/A/2017:2020
Intercalated tWH
geometric
IL_4WF9_065
IL_76758.2
IL_6SJ6_0461/A/1730:1735,
1/A/1740:1746
tSH-tSH-tHH-tHS
geometric
IL_4V9F_063
IL_47346.2
IL_6SJ6_1231/A/1757:1759,
1/A/1770:1772
No text annotation
IL_6SJ6_0481/A/1797:1798,
1/A/2007:2009
Single bulged A
homologous
IL_4WF9_068
IL_31462.7
IL_6SJ6_0491/A/1825:1831,
1/A/1840:1848
Kink-turn related
homologous
IL_7RQB_070
NA
IL_6SJ6_0501/A/1960:1961,
1/A/1991:1994
Multiple bulged bases
geometric
IL_6IV9_001
IL_82107.5
IL_6SJ6_0511/A/1961:1975,
1/A/1985:1991
No text annotation
IL_6SJ6_0521/A/2077:2079,
1/A/2644:2645
Major groove platform
homologous
IL_7RQB_078
NA
IL_6SJ6_0531/A/2081:2083,
1/A/2639:2642
No text annotation
homologous
IL_5J7L_321
IL_83389.2
IL_6SJ6_0541/A/2094:2096,
1/A/2469:2470
Single bulged U
homologous
IL_7RQB_080
NA
IL_6SJ6_1021/A/2094:2098,
1/A/2465:2470
Tandem non-canonical cWW pairs
geometric
IL_3WBM_002
IL_85033.2
IL_6SJ6_0551/A/2097:2099,
1/A/2464:2468
No text annotation
geometric
IL_4V8Q_188
NA
IL_6SJ6_0561/A/2108:2110,
1/A/2263:2266
Isolated tHS basepair with bulges
homologous
IL_7RQB_082
NA
IL_6SJ6_0571/A/2228:2231,
1/A/2247:2249
Isolated non-canonical cWW contact
geometric
IL_5UNE_001
IL_44465.1
IL_6SJ6_0581/A/2319:2350,
1/A/2359:2367
No text annotation
IL_6SJ6_0591/A/2377:2380,
1/A/2391:2394
Double sheared
homologous
IL_4WF9_087
IL_09705.15
IL_6SJ6_1241/A/2426:2430,
1/A/2441:2444
No text annotation
geometric
IL_1GID_008
NA
IL_6SJ6_0601/A/2428:2430,
1/A/2441:2442
Single bulged U
homologous
IL_4WF9_088
IL_89505.4
IL_6SJ6_0611/A/2480:2481,
1/A/2525:2527
Single stack bend
homologous
IL_4WF9_089
IL_26793.1
IL_6SJ6_0621/A/2481:2482,
1/A/2523:2525
Major groove platform
geometric
IL_4V9F_082
IL_48076.6
IL_6SJ6_0631/A/2484:2486,
1/A/2520:2521
Major groove platform
homologous
IL_4WF9_091
IL_48076.6
IL_6SJ6_0641/A/2486:2488,
1/A/2516:2520
Major groove minor groove platform with extra cWW
geometric
IL_7RQB_094
NA
IL_6SJ6_0651/A/2493:2498,
1/A/2506:2511
No text annotation
geometric
IL_5TBW_026
NA
IL_6SJ6_0661/A/2534:2536,
1/A/2606:2609
Major groove platform with extra pair
geometric
IL_7RQB_093
NA
IL_6SJ6_1061/A/2534:2539,
1/A/2601:2609
No text annotation
IL_6SJ6_0671/A/2537:2539,
1/A/2601:2605
Isolated non-canonical cWW with bulges
homologous
IL_4WF9_095
IL_07785.1
IL_6SJ6_0681/A/2539:2540,
1/A/2598:2601
Multiple bulged bases
geometric
IL_7RQB_098
NA
IL_6SJ6_1251/A/2549:2550,
1/A/2567:2570
Major groove platform with intercalation
homologous
IL_5J7L_342
IL_02555.1
IL_6SJ6_0701/A/2618:2619,
1/A/2628:2630
Major groove platform
geometric
IL_7A0S_088
IL_07039.3
IL_6SJ6_0711/A/2663:2667,
1/A/2801:2809
tSH-tHS-tHW
homologous
IL_4WF9_099
IL_04638.3
IL_6SJ6_0721/A/2678:2685,
1/A/2690:2696
No text annotation
IL_6SJ6_0731/A/2707:2711,
1/A/2752:2754
C-loop
homologous
IL_4WF9_101
IL_63596.11
IL_6SJ6_0741/A/2714:2718,
1/A/2745:2749
No text annotation
homologous
IL_4WF9_102
IL_23774.1
IL_6SJ6_1261/A/2722:2723,
1/A/2738:2741
Multiple bulged bases
homologous
IL_4WF9_103
IL_42626.2
IL_6SJ6_0761/A/2764:2769,
1/A/2789:2794
UAA/GAN with extra cWW
geometric
IL_4WF9_104
IL_49767.8
IL_6SJ6_0781/A/2858:2859,
1/A/2898:2900
Single bulged C
homologous
IL_7RQB_108
NA
IL_6SJ6_0791/A/2863:2865,
1/A/2891:2894
No text annotation
homologous
IL_4WF9_107
IL_31531.3
IL_6SJ6_0801/A/2867:2874,
1/A/2883:2889
No text annotation
IL_6SJ6_0811/B/21:27,
1/B/53:58
No text annotation
IL_6SJ6_0821/B/28:30,
1/B/48:52
No text annotation
homologous
IL_4WF9_114
NA
IL_6SJ6_0831/B/77:80,
1/B/91:94
Tandem non-canonical cWW pairs
geometric
IL_6JDV_002
IL_85033.2
IL_6SJ6_1131/B/78:82,
1/B/90:93
No text annotation
IL_6SJ6_0841/B/80:82,
1/B/90:91
Single stack bend
geometric
IL_7KGA_003
IL_90729.1
IL_6SJ6_0851/B/82:83,
1/B/88:90
Single base bend
geometric
IL_5IBB_340
IL_90729.1

Problematic loops

#loop idProblemSequence
IL_6SJ6_003No text annotation
IL_6SJ6_004Kink-turn
IL_6SJ6_089Other IL
IL_6SJ6_006No text annotation
IL_6SJ6_090No text annotation
IL_6SJ6_008No text annotation
IL_6SJ6_091No text annotation
IL_6SJ6_092Tandem non-canonical cWW pairs
IL_6SJ6_093Isolated non-canonical cWW pair
IL_6SJ6_094No text annotation
IL_6SJ6_095No text annotation
IL_6SJ6_021No text annotation
IL_6SJ6_096No text annotation
IL_6SJ6_032Tandem non-canonical cWW pairs
IL_6SJ6_101No text annotation
IL_6SJ6_041tSH-tHW-tHS-cWW
IL_6SJ6_042No text annotation
IL_6SJ6_047No text annotation
IL_6SJ6_103tSH-tHW-tHS
IL_6SJ6_104Partly complementary
IL_6SJ6_105No text annotation
IL_6SJ6_107Isolated non-canonical cWW contact
IL_6SJ6_069No text annotation
IL_6SJ6_108No text annotation
IL_6SJ6_109No text annotation
IL_6SJ6_110No text annotation
IL_6SJ6_075No text annotation
IL_6SJ6_111No text annotation
IL_6SJ6_077No text annotation
IL_6SJ6_112No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_6SJ6_0011/A/30:31,
1/A/520:527,
1/A/554:555
No text annotation
homologous
J3_7A0S_001
J3_60031.2
J3_6SJ6_0131/A/30:31,
1/A/520:530,
1/A/541:555
No text annotation
homologous
J3_4WF9_011
J3_92134.2
J3_6SJ6_0141/A/32:35,
1/A/491:507,
1/A/514:519
No text annotation
homologous
J3_9DFE_003
J3_30040.2
J3_6SJ6_0151/A/56:67,
1/A/74:76,
1/A/109:113
No text annotation
homologous
J3_4WF9_001
J3_47707.1
J3_6SJ6_0241/A/340:344,
1/A/359:368,
1/A/380:384
No text annotation
homologous
J3_4WF9_015
J3_46299.2
J3_6SJ6_0171/A/728:734,
1/A/818:820,
1/A/836:839
No text annotation
homologous
J3_5J7L_038
J3_64189.2
J3_6SJ6_0041/A/743:745,
1/A/777:781,
1/A/805:808
No text annotation
homologous
J3_7RQB_005
NA
J3_6SJ6_0181/A/1335:1340,
1/A/1669:1671,
1/A/1683:1686
No text annotation
homologous
J3_4WF9_004
J3_32852.6
J3_6SJ6_0251/A/1342:1346,
1/A/1649:1655,
1/A/1664:1667
No text annotation
homologous
J3_4WF9_005
J3_68164.1
J3_6SJ6_0201/A/1347:1351,
1/A/1375:1382,
1/A/1645:1648
No text annotation
J3_6SJ6_0071/A/1350:1351,
1/A/1375:1382,
1/A/1645:1647
No text annotation
J3_6SJ6_0091/A/2118:2123,
1/A/2220:2228,
1/A/2249:2255
No text annotation
J3_6SJ6_0211/A/2118:2122,
1/A/2221:2231,
1/A/2247:2255
No text annotation
J3_6SJ6_0221/A/2309:2311,
1/A/2411:2422,
1/A/2448:2454
No text annotation
homologous
J3_5J7L_070
J3_20992.1
J3_6SJ6_0111/A/2544:2547,
1/A/2572:2574,
1/A/2588:2594
No text annotation
J3_6SJ6_0121/A/2831:2835,
1/A/2851:2856,
1/A/2902:2909
No text annotation
J4_6SJ6_0091/A/640:653,
1/A/663:673,
1/A/680:683,
1/A/695:704
No text annotation
J4_6SJ6_0021/A/1308:1313,
1/A/1331:1332,
1/A/1689:1692,
1/A/2036:2037
No text annotation
homologous
J4_4WF9_004
J4_64571.5
J4_6SJ6_0031/A/1385:1387,
1/A/1418:1422,
1/A/1439:1442,
1/A/1641:1642
No text annotation
J4_6SJ6_0041/A/1710:1727,
1/A/1749:1751,
1/A/1778:1791,
1/A/2015:2021
No text annotation
J4_6SJ6_0051/A/1713:1727,
1/A/1749:1751,
1/A/1778:1791,
1/A/2015:2020
No text annotation
J4_6SJ6_0101/A/1799:1803,
1/A/1815:1819,
1/A/1854:1857,
1/A/2002:2006
No text annotation
homologous
J4_7A0S_008
J4_61477.5
J4_6SJ6_0071/A/2312:2350,
1/A/2359:2374,
1/A/2397:2399,
1/A/2408:2410
No text annotation
J4_6SJ6_0081/A/2670:2673,
1/A/2701:2703,
1/A/2758:2762,
1/A/2796:2798
No text annotation
homologous
J4_9DFE_010
J4_77044.4
J5_6SJ6_0071/A/47:54,
1/A/115:121,
1/A/128:130,
1/A/149:151,
1/A/178:180
No text annotation
J5_6SJ6_0081/A/271:283,
1/A/288:302,
1/A/415:421,
1/A/445:453,
1/A/466:470
No text annotation
J5_6SJ6_0031/A/576:578,
1/A/603:609,
1/A/618:622,
1/A/1299:1300,
1/A/2044:2045
No text annotation
J5_6SJ6_0091/A/627:632,
1/A/713:716,
1/A/854:857,
1/A/1234:1235,
1/A/1288:1294
No text annotation
homologous
J5_4WF9_004
J5_74302.5
J5_6SJ6_0101/A/2084:2091,
1/A/2473:2481,
1/A/2525:2533,
1/A/2610:2615,
1/A/2633:2638
No text annotation
J5_6SJ6_0061/A/2100:2104,
1/A/2270:2273,
1/A/2285:2286,
1/A/2308:2309,
1/A/2454:2463
No text annotation
J7_6SJ6_0031/A/9:15,
1/A/570:576,
1/A/2045:2050,
1/A/2067:2070,
1/A/2652:2657,
1/A/2815:2816,
1/A/2913:2914
No text annotation
J7_6SJ6_0021/A/862:867,
1/A/880:881,
1/A/987:990,
1/A/1015:1020,
1/A/1031:1035,
1/A/1207:1210,
1/A/1222:1229
No text annotation

Problematic loops

#loop idProblemSequence
J3_6SJ6_002No text annotation
J3_6SJ6_016No text annotation
J3_6SJ6_003No text annotation
J3_6SJ6_005No text annotation
J3_6SJ6_019No text annotation
J3_6SJ6_006No text annotation
J3_6SJ6_008No text annotation
J3_6SJ6_010No text annotation
J3_6SJ6_023No text annotation
J4_6SJ6_001No text annotation
J4_6SJ6_006No text annotation
J5_6SJ6_001No text annotation
J5_6SJ6_002No text annotation
J5_6SJ6_004No text annotation
J5_6SJ6_005No text annotation
J7_6SJ6_001No text annotation

Coloring options:
Copyright 2025 BGSU RNA group. Page generated in 0.1034 s