HL_6SJ6_006

3D structure

PDB id

6SJ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-RsfS complex from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

GAGAACUGAAACAUCUUAGUACC

Length

23 nucleotides

Bulged bases

6SJ6|1|A|A|199

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SJ6|1|A|G|190
6SJ6|1|A|A|191
6SJ6|1|A|G|192
6SJ6|1|A|A|193
6SJ6|1|A|A|194
6SJ6|1|A|C|195
6SJ6|1|A|U|196
6SJ6|1|A|G|197
6SJ6|1|A|A|198
6SJ6|1|A|A|199
6SJ6|1|A|A|200
6SJ6|1|A|C|201
6SJ6|1|A|A|202
6SJ6|1|A|U|203
6SJ6|1|A|C|204
6SJ6|1|A|U|205
6SJ6|1|A|U|206
6SJ6|1|A|A|207
6SJ6|1|A|G|208
6SJ6|1|A|U|209
6SJ6|1|A|A|210
6SJ6|1|A|C|211
6SJ6|1|A|C|212

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L28

Chain 6

50S ribosomal protein L34

Chain O

50S ribosomal protein L15