HL_6SJ6_025

3D structure

PDB id

6SJ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-RsfS complex from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

ACGAGGGGCCGGUUACCGAAU

Length

21 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SJ6|1|A|A|920
6SJ6|1|A|C|921
6SJ6|1|A|G|922
6SJ6|1|A|A|923
6SJ6|1|A|G|924
6SJ6|1|A|G|925
6SJ6|1|A|G|926
6SJ6|1|A|G|927
6SJ6|1|A|C|928
6SJ6|1|A|C|929
6SJ6|1|A|G|937
6SJ6|1|A|G|938
6SJ6|1|A|U|939
6SJ6|1|A|U|940
6SJ6|1|A|A|941
6SJ6|1|A|C|942
6SJ6|1|A|C|943
6SJ6|1|A|G|944
6SJ6|1|A|A|945
6SJ6|1|A|A|946
6SJ6|1|A|U|947

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain P

50S ribosomal protein L16