HL_6SJ6_067

3D structure

PDB id

6SJ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-RsfS complex from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

CUUUG

Length

5 nucleotides

Bulged bases

6SJ6|1|A|U|1216

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6SJ6_067 not in the Motif Atlas

Geometric match to HL_4LFB_005

Geometric discrepancy: 0.3413

The information below is about HL_4LFB_005

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

6SJ6|1|A|C|1214
6SJ6|1|A|U|1215
6SJ6|1|A|U|1216
6SJ6|1|A|U|1217
6SJ6|1|A|G|1218

Current chains

Chain A

23S ribosomal RNA

Nearby chains