HL_6SKF_007

3D structure

PDB id

6SKF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

CACUGAGACACG(OMG)G

Length

14 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SKF|1|Aa|C|308
6SKF|1|Aa|A|309
6SKF|1|Aa|C|310
6SKF|1|Aa|U|311
6SKF|1|Aa|G|312
6SKF|1|Aa|A|313
6SKF|1|Aa|G|314
6SKF|1|Aa|A|315
6SKF|1|Aa|C|316
6SKF|1|Aa|A|317
6SKF|1|Aa|C|318
6SKF|1|Aa|G|319
6SKF|1|Aa|OMG|320
6SKF|1|Aa|G|321

Current chains

Chain Aa

16S rRNA

Nearby chains

Chain Af

30S ribosomal protein S4e

Chain Ah

30S ribosomal protein S6e

Chain Ak

30S ribosomal protein S8e