HL_6SKF_025

3D structure

PDB id

6SKF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

C(4AC)GAAAGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: 4AC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SKF|1|Aa|C|1216
6SKF|1|Aa|4AC|1217
6SKF|1|Aa|G|1218
6SKF|1|Aa|A|1219
6SKF|1|Aa|A|1220
6SKF|1|Aa|A|1221
6SKF|1|Aa|G|1222
6SKF|1|Aa|G|1223

Current chains

Chain Aa

16S rRNA

Nearby chains

Chain Ap

30S ribosomal protein S13

Chain Au

30S ribosomal protein S19

Chain Av

30S ribosomal protein S19e