HL_6SKF_122

3D structure

PDB id

6SKF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

CGAAAAGGUAUC(OMG)

Length

13 nucleotides

Bulged bases

6SKF|1|BA|A|2371, 6SKF|1|BA|C|2378

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SKF|1|BA|C|2367
6SKF|1|BA|G|2368
6SKF|1|BA|A|2369
6SKF|1|BA|A|2370
6SKF|1|BA|A|2371
6SKF|1|BA|A|2372
6SKF|1|BA|G|2373
6SKF|1|BA|G|2374
6SKF|1|BA|U|2375
6SKF|1|BA|A|2376
6SKF|1|BA|U|2377
6SKF|1|BA|C|2378
6SKF|1|BA|OMG|2379

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BJ

50S ribosomal protein L10e

Chain BU

50S ribosomal protein L21e