HL_6SKG_037
3D structure
- PDB id
- 6SKG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of T. kodakarensis 70S ribosome in TkNat10 deleted strain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- GGGCGAC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6SKG_037 not in the Motif Atlas
- Homologous match to HL_4V9F_008
- Geometric discrepancy: 0.124
- The information below is about HL_4V9F_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_37369.2
- Basepair signature
- cWW-tSH-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
6SKG|1|BA|G|237
6SKG|1|BA|G|238
6SKG|1|BA|G|239
6SKG|1|BA|C|240
6SKG|1|BA|G|241
6SKG|1|BA|A|242
6SKG|1|BA|C|243
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BO
- 50S ribosomal protein L15
- Chain Bl
- 50S ribosomal protein L44e
Coloring options: