HL_6SPB_044
3D structure
- PDB id
- 6SPB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 50s ribosome from a clinical isolate with a mutation in uL6
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- UUUAUUAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 6SPB|1|A|A|1767, 6SPB|1|A|U|1768, 6SPB|1|A|U|1769, 6SPB|1|A|A|1773
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6SPB_044 not in the Motif Atlas
- Homologous match to HL_5J7L_178
- Geometric discrepancy: 0.0662
- The information below is about HL_5J7L_178
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01962.2
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 6
Unit IDs
6SPB|1|A|U|1764
6SPB|1|A|U|1765
6SPB|1|A|U|1766
6SPB|1|A|A|1767
6SPB|1|A|U|1768
6SPB|1|A|U|1769
6SPB|1|A|A|1770
6SPB|1|A|A|1771
6SPB|1|A|A|1772
6SPB|1|A|A|1773
6SPB|1|A|A|1774
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L34
- Chain C
- 50S ribosomal protein L2
Coloring options: