HL_6SPB_065
3D structure
- PDB id
- 6SPB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 50s ribosome from a clinical isolate with a mutation in uL6
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- CUGAAAGCAUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 6SPB|1|A|G|2738, 6SPB|1|A|C|2742
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6SPB_065 not in the Motif Atlas
- Homologous match to HL_5J7L_199
- Geometric discrepancy: 0.0931
- The information below is about HL_5J7L_199
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_74055.2
- Basepair signature
- cWW-tWH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 7
Unit IDs
6SPB|1|A|C|2732
6SPB|1|A|U|2733
6SPB|1|A|G|2734
6SPB|1|A|A|2735
6SPB|1|A|A|2736
6SPB|1|A|A|2737
6SPB|1|A|G|2738
6SPB|1|A|C|2739
6SPB|1|A|A|2740
6SPB|1|A|U|2741
6SPB|1|A|C|2742
6SPB|1|A|U|2743
6SPB|1|A|A|2744
6SPB|1|A|A|2745
6SPB|1|A|G|2746
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 6
- 50S ribosomal protein L36
- Chain G
- 50S ribosomal protein L6
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