HL_6SPF_081

3D structure

PDB id

6SPF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70s ribosome from an aminoglycoside resistant clinical isolate

Experimental method

ELECTRON MICROSCOPY

Resolution

2.89 Å

Loop

Sequence

GUAAGUUAAUACCUUGCU

Length

18 nucleotides

Bulged bases

6SPF|1|a|A|459

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SPF|1|a|G|452
6SPF|1|a|U|453
6SPF|1|a|A|454
6SPF|1|a|A|455
6SPF|1|a|G|456
6SPF|1|a|U|457
6SPF|1|a|U|458
6SPF|1|a|A|459
6SPF|1|a|A|460
6SPF|1|a|U|461
6SPF|1|a|A|462
6SPF|1|a|C|463
6SPF|1|a|C|464
6SPF|1|a|U|465
6SPF|1|a|U|466
6SPF|1|a|G|467
6SPF|1|a|C|468
6SPF|1|a|U|469

Current chains

Chain a

16S rRNA

Nearby chains

Chain p

30S ribosomal protein S16