HL_6SPF_094
3D structure
- PDB id
- 6SPF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70s ribosome from an aminoglycoside resistant clinical isolate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.89 Å
Loop
- Sequence
- CCAAGCCGCGAGGUGGAG
- Length
- 18 nucleotides
- Bulged bases
- 6SPF|1|a|A|1263, 6SPF|1|a|G|1265
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6SPF|1|a|C|1253
6SPF|1|a|C|1254
6SPF|1|a|A|1255
6SPF|1|a|A|1256
6SPF|1|a|G|1257
6SPF|1|a|C|1258
6SPF|1|a|C|1259
6SPF|1|a|G|1260
6SPF|1|a|C|1261
6SPF|1|a|G|1262
6SPF|1|a|A|1263
6SPF|1|a|G|1264
6SPF|1|a|G|1265
6SPF|1|a|U|1266
6SPF|1|a|G|1267
6SPF|1|a|G|1268
6SPF|1|a|A|1269
6SPF|1|a|G|1270
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain m
- 30S ribosomal protein S13
- Chain n
- 30S ribosomal protein S14
- Chain s
- 30S ribosomal protein S19
Coloring options: