HL_6SPG_030

3D structure

PDB id

6SPG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70s ribosome from a clinical isolate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

CACGUAAGUG

Length

10 nucleotides

Bulged bases

6SPG|1|A|U|1163, 6SPG|1|A|A|1164, 6SPG|1|A|A|1165, 6SPG|1|A|G|1166

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SPG|1|A|C|1159
6SPG|1|A|A|1160
6SPG|1|A|C|1161
6SPG|1|A|G|1162
6SPG|1|A|U|1163
6SPG|1|A|A|1164
6SPG|1|A|A|1165
6SPG|1|A|G|1166
6SPG|1|A|U|1167
6SPG|1|A|G|1168

Current chains

Chain A

23S ribosomal RNA

Nearby chains