HL_6SPG_093

3D structure

PDB id

6SPG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70s ribosome from a clinical isolate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6SPG_093 not in the Motif Atlas

Geometric match to HL_2HW8_001

Geometric discrepancy: 0.2351

The information below is about HL_2HW8_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.3

Basepair signature

cWW-tSW-F

Number of instances in this motif group

62

Unit IDs

6SPG|1|a|C|1022
6SPG|1|a|U|1023
6SPG|1|a|U|1024
6SPG|1|a|C|1025
6SPG|1|a|G|1026
6SPG|1|a|G|1027

Current chains

Chain a

16S ribosomal RNA

Nearby chains