HL_6SPG_107

3D structure

PDB id

6SPG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70s ribosome from a clinical isolate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

UCUGCAACUCGA

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SPG|1|a|U|1307
6SPG|1|a|C|1308
6SPG|1|a|U|1309
6SPG|1|a|G|1310
6SPG|1|a|C|1311
6SPG|1|a|A|1312
6SPG|1|a|A|1313
6SPG|1|a|C|1314
6SPG|1|a|U|1315
6SPG|1|a|C|1316
6SPG|1|a|G|1317
6SPG|1|a|A|1318

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain m

30S ribosomal protein S13

Chain n

30S ribosomal protein S14

Chain s

30S ribosomal protein S19