HL_6SZS_016
3D structure
- PDB id
- 6SZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.06 Å
Loop
- Sequence
- CUUAGG
- Length
- 6 nucleotides
- Bulged bases
- 6SZS|1|A|U|546
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6SZS_016 not in the Motif Atlas
- Geometric match to HL_4U7U_001
- Geometric discrepancy: 0.1893
- The information below is about HL_4U7U_001
- Detailed Annotation
- UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_61337.1
- Basepair signature
- cWW-tSW-F
- Number of instances in this motif group
- 49
Unit IDs
6SZS|1|A|C|544
6SZS|1|A|U|545
6SZS|1|A|U|546
6SZS|1|A|A|547
6SZS|1|A|G|548
6SZS|1|A|G|549
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain R
- 50S ribosomal protein L21
Coloring options: