HL_6T4Q_075
3D structure
- PDB id
- 6T4Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- UGAUCA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6T4Q_075 not in the Motif Atlas
- Homologous match to HL_8C3A_067
- Geometric discrepancy: 0.0697
- The information below is about HL_8C3A_067
- Detailed Annotation
- Ribsomal LSU H95
- Broad Annotation
- Ribsomal LSU H95
- Motif group
- HL_65794.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
6T4Q|1|C1|U|3068
6T4Q|1|C1|G|3069
6T4Q|1|C1|A|3070
6T4Q|1|C1|U|3071
6T4Q|1|C1|C|3072
6T4Q|1|C1|A|3073
Current chains
- Chain C1
- 25S rRNA
Nearby chains
- Chain LR
- 60S ribosomal protein L19-A
- Chain LU
- 60S ribosomal protein L22-A
- Chain Ld
- 60S ribosomal protein L31-A
Coloring options: