HL_6T59_024
3D structure
- PDB id
- 6T59 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 and nascent chain-associated complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- CCUUCCAGUCCG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6T59_024 not in the Motif Atlas
- Geometric match to HL_4ENC_001
- Geometric discrepancy: 0.3496
- The information below is about HL_4ENC_001
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_00911.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
6T59|1|54|C|1436
6T59|1|54|C|1437
6T59|1|54|U|1438
6T59|1|54|U|1440
6T59|1|54|C|1441
6T59|1|54|C|1442
6T59|1|54|A|1443
6T59|1|54|G|1444
6T59|1|54|U|1445
6T59|1|54|C|1446
6T59|1|54|C|1447
6T59|1|54|G|1448
Current chains
- Chain 54
- 28S ribosomal RNA
Nearby chains
- Chain C3
- uL4
- Chain F3
- Ul30
- Chain Q3
- eL18
- Chain b3
- eL29
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