HL_6T59_034

3D structure

PDB id

6T59 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 and nascent chain-associated complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

GGUGGCCAUGGAAGUCGGAAUCC

Length

23 nucleotides

Bulged bases

6T59|1|54|G|1985, 6T59|1|54|U|1986

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T59|1|54|G|1972
6T59|1|54|G|1973
6T59|1|54|U|1974
6T59|1|54|G|1975
6T59|1|54|G|1976
6T59|1|54|C|1977
6T59|1|54|C|1978
6T59|1|54|A|1979
6T59|1|54|U|1980
6T59|1|54|G|1981
6T59|1|54|G|1982
6T59|1|54|A|1983
6T59|1|54|A|1984
6T59|1|54|G|1985
6T59|1|54|U|1986
6T59|1|54|C|1987
6T59|1|54|G|1988
6T59|1|54|G|1989
6T59|1|54|A|1990
6T59|1|54|A|1991
6T59|1|54|U|1992
6T59|1|54|C|1993
6T59|1|54|C|1994

Current chains

Chain 54

28S ribosomal RNA

Nearby chains

Chain I3

60S ribosomal protein L10

Chain s3

uL10

Chain t3

Ribosomal protein L12