HL_6T59_075

3D structure

PDB id

6T59 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 and nascent chain-associated complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

CGGAAAGGGG

Length

10 nucleotides

Bulged bases

6T59|1|54|A|4910, 6T59|1|54|A|4911, 6T59|1|54|G|4914

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6T59_075 not in the Motif Atlas

Geometric match to HL_7RQB_011

Geometric discrepancy: 0.3267

The information below is about HL_7RQB_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_70546.1

Basepair signature

cWW-F

Number of instances in this motif group

18

Unit IDs

6T59|1|54|C|4906
6T59|1|54|G|4907
6T59|1|54|G|4908
6T59|1|54|A|4909
6T59|1|54|A|4910
6T59|1|54|A|4911
6T59|1|54|G|4912
6T59|1|54|G|4913
6T59|1|54|G|4914
6T59|1|54|G|4915

Current chains

Chain 54

28S ribosomal RNA

Nearby chains

Chain B3

uL3

Chain O3

uL13