HL_6T7T_078
3D structure
- PDB id
- 6T7T (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast 80S ribosome stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CCUUG
- Length
- 5 nucleotides
- Bulged bases
- 6T7T|1|C1|U|3351
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6T7T_078 not in the Motif Atlas
- Geometric match to HL_7KI3_001
- Geometric discrepancy: 0.2662
- The information below is about HL_7KI3_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.5
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 19
Unit IDs
6T7T|1|C1|C|3349
6T7T|1|C1|C|3350
6T7T|1|C1|U|3351
6T7T|1|C1|U|3352
6T7T|1|C1|G|3353
Current chains
- Chain C1
- 25S rRNA
Nearby chains
- Chain LU
- 60S ribosomal protein L22-A
- Chain SI
- 40S ribosomal protein S8
Coloring options: