HL_6T83_006

3D structure

PDB id

6T83 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast disome (di-ribosome) stalled on poly(A) tract.

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CAUAG

Length

5 nucleotides

Bulged bases

6T83|1|1b|U|210, 6T83|1|1b|A|211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6T83_006 not in the Motif Atlas

Homologous match to HL_5TBW_006

Geometric discrepancy: 0.159

The information below is about HL_5TBW_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

6T83|1|1b|C|208
6T83|1|1b|A|209
6T83|1|1b|U|210
6T83|1|1b|A|211
6T83|1|1b|G|212

Current chains

Chain 1b

25S rRNA

Nearby chains

Chain Cy

60S ribosomal protein L4-A

Chain Yy

60S ribosomal protein L26-A