HL_6T83_012

3D structure

PDB id

6T83 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast disome (di-ribosome) stalled on poly(A) tract.

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CCUCGG

Length

6 nucleotides

Bulged bases

6T83|1|1b|U|545, 6T83|1|1b|C|546

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6T83_012 not in the Motif Atlas

Homologous match to HL_5TBW_012

Geometric discrepancy: 0.4719

The information below is about HL_5TBW_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.1

Basepair signature

cWW-F-F

Number of instances in this motif group

7

Unit IDs

6T83|1|1b|C|543
6T83|1|1b|C|544
6T83|1|1b|U|545
6T83|1|1b|C|546
6T83|1|1b|G|547
6T83|1|1b|G|548

Current chains

Chain 1b

25S rRNA

Nearby chains