HL_6T83_024

3D structure

PDB id

6T83 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast disome (di-ribosome) stalled on poly(A) tract.

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CUUAAUUG

Length

8 nucleotides

Bulged bases

6T83|1|1b|U|1081

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6T83_024 not in the Motif Atlas

Homologous match to HL_8C3A_024

Geometric discrepancy: 0.1568

The information below is about HL_8C3A_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77436.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

6T83|1|1b|C|1076
6T83|1|1b|U|1077
6T83|1|1b|U|1078
6T83|1|1b|A|1079
6T83|1|1b|A|1080
6T83|1|1b|U|1081
6T83|1|1b|U|1082
6T83|1|1b|G|1083

Current chains

Chain 1b

25S rRNA

Nearby chains

Chain Dy

60S ribosomal protein L5

Chain Ty

60S ribosomal protein L21-A

Chain by

60S ribosomal protein L29