3D structure

PDB id
6T83 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
Experimental method
ELECTRON MICROSCOPY
Resolution
4 Å

Loop

Sequence
CUUCGG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6T83_077 not in the Motif Atlas
Geometric match to HL_2ZNI_001
Geometric discrepancy: 0.3428
The information below is about HL_2ZNI_001
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_75660.5
Basepair signature
cWW-F
Number of instances in this motif group
19

Unit IDs

6T83|1|2b|C|230
6T83|1|2b|U|231
6T83|1|2b|U|232
6T83|1|2b|C|233
6T83|1|2b|G|234
6T83|1|2b|G|235

Current chains

Chain 2b
18S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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