HL_6T83_092
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- AGGUGAAAUU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6T83_092 not in the Motif Atlas
- Homologous match to HL_4V88_206
- Geometric discrepancy: 0.1926
- The information below is about HL_4V88_206
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
6T83|1|2b|A|900
6T83|1|2b|G|901
6T83|1|2b|G|902
6T83|1|2b|U|903
6T83|1|2b|G|904
6T83|1|2b|A|905
6T83|1|2b|A|906
6T83|1|2b|A|907
6T83|1|2b|U|908
6T83|1|2b|U|909
Current chains
- Chain 2b
- 18S rRNA
Nearby chains
- Chain 1b
- Large subunit ribosomal RNA; LSU rRNA
- Chain Ba
- 40S ribosomal protein S1-A
- Chain Fb
- Rps5p
- Chain Ob
- 40S ribosomal protein S14-A
- Chain ab
- 40S ribosomal protein S26-A
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