HL_6T83_138

3D structure

PDB id

6T83 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast disome (di-ribosome) stalled on poly(A) tract.

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GUCUUC

Length

6 nucleotides

Bulged bases

6T83|1|Aa|C|765

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6T83_138 not in the Motif Atlas

Homologous match to HL_5TBW_018

Geometric discrepancy: 0.1979

The information below is about HL_5TBW_018

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84570.1

Basepair signature

cWW-cWW-F

Number of instances in this motif group

6

Unit IDs

6T83|1|Aa|G|763
6T83|1|Aa|U|764
6T83|1|Aa|C|765
6T83|1|Aa|U|766
6T83|1|Aa|U|767
6T83|1|Aa|C|768

Current chains

Chain Aa

25S rRNA

Nearby chains

Chain Na

60S ribosomal protein L13-A