HL_6T83_176
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- UUAAACGAUAACG
- Length
- 13 nucleotides
- Bulged bases
- 6T83|1|Aa|A|2637, 6T83|1|Aa|C|2644
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6T83_176 not in the Motif Atlas
- Homologous match to HL_5TBW_055
- Geometric discrepancy: 0.1712
- The information below is about HL_5TBW_055
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_19870.9
- Basepair signature
- cWW-tHH-cWW-tHS-F-F-tWW
- Number of instances in this motif group
- 8
Unit IDs
6T83|1|Aa|U|2633
6T83|1|Aa|U|2634
6T83|1|Aa|A|2635
6T83|1|Aa|A|2636
6T83|1|Aa|A|2637
6T83|1|Aa|C|2638
6T83|1|Aa|G|2639
6T83|1|Aa|A|2640
6T83|1|Aa|U|2641
6T83|1|Aa|A|2642
6T83|1|Aa|A|2643
6T83|1|Aa|C|2644
6T83|1|Aa|G|2645
Current chains
- Chain Aa
- 25S rRNA
Nearby chains
- Chain Bb
- 5S ribosomal RNA; 5S rRNA
- Chain E
- 60S ribosomal protein L21-A
- Chain La
- 60S ribosomal protein L10
- Chain M
- 60S ribosomal protein L29
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