HL_6T83_207
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- CCUGAGAAACGG
- Length
- 12 nucleotides
- Bulged bases
- 6T83|1|a|A|400, 6T83|1|a|C|402, 6T83|1|a|G|403
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6T83_207 not in the Motif Atlas
- Homologous match to HL_4V88_195
- Geometric discrepancy: 0.1616
- The information below is about HL_4V88_195
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
6T83|1|a|C|393
6T83|1|a|C|394
6T83|1|a|U|395
6T83|1|a|G|396
6T83|1|a|A|397
6T83|1|a|G|398
6T83|1|a|A|399
6T83|1|a|A|400
6T83|1|a|A|401
6T83|1|a|C|402
6T83|1|a|G|403
6T83|1|a|G|404
Current chains
- Chain a
- 18S rRNA
Nearby chains
- Chain f
- 40S ribosomal protein S4-A
- Chain h
- 40S ribosomal protein S6-A
- Chain j
- 40S ribosomal protein S8-A
- Chain z
- 40S ribosomal protein S24-A
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