HL_6TC3_032
3D structure
- PDB id
- 6TC3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GAUCAGAAUGC
- Length
- 11 nucleotides
- Bulged bases
- 6TC3|1|16S1|U|1364
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6TC3_032 not in the Motif Atlas
- Homologous match to HL_4LFB_030
- Geometric discrepancy: 0.0726
- The information below is about HL_4LFB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86432.1
- Basepair signature
- cWW-tWH-tWH-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
6TC3|1|16S1|G|1356
6TC3|1|16S1|A|1357
6TC3|1|16S1|U|1358
6TC3|1|16S1|C|1359
6TC3|1|16S1|A|1360
6TC3|1|16S1|G|1361
6TC3|1|16S1|A|1362
6TC3|1|16S1|A|1363
6TC3|1|16S1|U|1364
6TC3|1|16S1|G|1365
6TC3|1|16S1|C|1366
Current chains
- Chain 16S1
- 16S rRNA
Nearby chains
- Chain S031
- 30S ribosomal protein S3
- Chain S091
- 30S ribosomal protein S9
- Chain S101
- 30S ribosomal protein S10
- Chain S141
- 30S ribosomal protein S14
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