HL_6TC3_059

3D structure

PDB id

6TC3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GGUCACU

Length

7 nucleotides

Bulged bases

6TC3|1|23S1|C|885

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TC3|1|23S1|G|882
6TC3|1|23S1|G|883
6TC3|1|23S1|U|884
6TC3|1|23S1|C|885
6TC3|1|23S1|A|892
6TC3|1|23S1|C|893
6TC3|1|23S1|U|894

Current chains

Chain 23S1

23S rRNA

Nearby chains

Chain S131

30S ribosomal protein S13