HL_6TNN_006
3D structure
- PDB id
- 6TNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.07 Å
Loop
- Sequence
- GAAACAUC
- Length
- 8 nucleotides
- Bulged bases
- 6TNN|1|U|A|197
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6TNN_006 not in the Motif Atlas
- Geometric match to HL_4WF9_006
- Geometric discrepancy: 0.105
- The information below is about HL_4WF9_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_48677.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 22
Unit IDs
6TNN|1|U|G|195
6TNN|1|U|A|196
6TNN|1|U|A|197
6TNN|1|U|A|198
6TNN|1|U|C|199
6TNN|1|U|A|200
6TNN|1|U|U|201
6TNN|1|U|C|202
Current chains
- Chain U
- pre-23S rRNA
Nearby chains
- Chain e
- 50S ribosomal protein L15
- Chain u
- 50S ribosomal protein L28
Coloring options: