HL_6TNN_026

3D structure

PDB id

6TNN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.07 Å

Loop

Sequence

CCUACCG

Length

7 nucleotides

Bulged bases

6TNN|1|U|C|931, 6TNN|1|U|U|932

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6TNN_026 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.2941

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

6TNN|1|U|C|930
6TNN|1|U|C|931
6TNN|1|U|U|932
6TNN|1|U|A|933
6TNN|1|U|C|934
6TNN|1|U|C|935
6TNN|1|U|G|936

Current chains

Chain U

pre-23S rRNA

Nearby chains