HL_6TNN_056
3D structure
- PDB id
- 6TNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.07 Å
Loop
- Sequence
- GGUUGGAAAUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6TNN_056 not in the Motif Atlas
- Homologous match to HL_5J7L_188
- Geometric discrepancy: 0.4523
- The information below is about HL_5J7L_188
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_11805.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
6TNN|1|U|G|2330
6TNN|1|U|G|2331
6TNN|1|U|U|2332
6TNN|1|U|U|2333
6TNN|1|U|G|2334
6TNN|1|U|G|2335
6TNN|1|U|A|2336
6TNN|1|U|A|2337
6TNN|1|U|A|2338
6TNN|1|U|U|2339
6TNN|1|U|C|2340
Current chains
- Chain U
- pre-23S rRNA
Nearby chains
- Chain V
- 5S ribosomal RNA; 5S rRNA
- Chain Z
- 50S ribosomal protein L5
- Chain h
- 50S ribosomal protein L18
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