HL_6TNN_062
3D structure
- PDB id
- 6TNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.07 Å
Loop
- Sequence
- UGUAGUCG
- Length
- 8 nucleotides
- Bulged bases
- 6TNN|1|U|G|2556
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6TNN_062 not in the Motif Atlas
- Homologous match to HL_5J7L_194
- Geometric discrepancy: 0.1799
- The information below is about HL_5J7L_194
- Detailed Annotation
- GNRA variation
- Broad Annotation
- GNRA variation
- Motif group
- HL_31585.4
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 20
Unit IDs
6TNN|1|U|U|2555
6TNN|1|U|G|2556
6TNN|1|U|U|2557
6TNN|1|U|A|2558
6TNN|1|U|G|2559
6TNN|1|U|U|2560
6TNN|1|U|C|2561
6TNN|1|U|G|2562
Current chains
- Chain U
- pre-23S rRNA
Nearby chains
- Chain a
- 50S ribosomal protein L6
- Chain t
- 50S ribosomal protein L36
Coloring options: