HL_6TNU_013

3D structure

PDB id

6TNU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAUUCG

Length

6 nucleotides

Bulged bases

6TNU|1|2|A|492, 6TNU|1|2|U|493

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6TNU_013 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.3009

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.2

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

6TNU|1|2|C|491
6TNU|1|2|A|492
6TNU|1|2|U|493
6TNU|1|2|U|494
6TNU|1|2|C|495
6TNU|1|2|G|496

Current chains

Chain 2

18S rRNA

Nearby chains