HL_6U48_025

3D structure

PDB id

6U48 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S with phazolicin (PHZ) bound in exit tunnel

Experimental method

ELECTRON MICROSCOPY

Resolution

2.87 Å

Loop

Sequence

GGGGUCACUUAC

Length

12 nucleotides

Bulged bases

6U48|1|CA|C|885, 6U48|1|CA|A|892, 6U48|1|CA|A|896

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6U48|1|CA|G|880
6U48|1|CA|G|881
6U48|1|CA|G|882
6U48|1|CA|G|883
6U48|1|CA|U|884
6U48|1|CA|C|885
6U48|1|CA|A|892
6U48|1|CA|C|893
6U48|1|CA|U|894
6U48|1|CA|U|895
6U48|1|CA|A|896
6U48|1|CA|C|897

Current chains

Chain CA

23S rRNA

Nearby chains