HL_6U48_050
3D structure
- PDB id
- 6U48 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 50S with phazolicin (PHZ) bound in exit tunnel
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.87 Å
Loop
- Sequence
- GUG(6MZ)AGAUGC
- Length
- 10 nucleotides
- Bulged bases
- 6U48|1|CA|A|2031, 6U48|1|CA|G|2032
- QA status
- Modified nucleotides: 6MZ
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6U48_050 not in the Motif Atlas
- Homologous match to HL_5J7L_183
- Geometric discrepancy: 0.0921
- The information below is about HL_5J7L_183
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_61996.3
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
6U48|1|CA|G|2027
6U48|1|CA|U|2028
6U48|1|CA|G|2029
6U48|1|CA|6MZ|2030
6U48|1|CA|A|2031
6U48|1|CA|G|2032
6U48|1|CA|A|2033
6U48|1|CA|U|2034
6U48|1|CA|G|2035
6U48|1|CA|C|2036
Current chains
- Chain CA
- 23S rRNA
Nearby chains
- Chain C1
- 50S ribosomal protein bL32
- Chain CD
- 50S ribosomal protein uL3
- Chain CK
- 50S ribosomal protein uL13
- Chain CS
- 50S ribosomal protein bL21
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