HL_6U48_073

3D structure

PDB id

6U48 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S with phazolicin (PHZ) bound in exit tunnel

Experimental method

ELECTRON MICROSCOPY

Resolution

2.87 Å

Loop

Sequence

CGACGCUUAUGCGUUG

Length

16 nucleotides

Bulged bases

6U48|1|CA|U|1174, 6U48|1|CA|A|1175, 6U48|1|CA|U|1176

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6U48|1|CA|C|1167
6U48|1|CA|G|1168
6U48|1|CA|A|1169
6U48|1|CA|C|1170
6U48|1|CA|G|1171
6U48|1|CA|C|1172
6U48|1|CA|U|1173
6U48|1|CA|U|1174
6U48|1|CA|A|1175
6U48|1|CA|U|1176
6U48|1|CA|G|1177
6U48|1|CA|C|1178
6U48|1|CA|G|1179
6U48|1|CA|U|1180
6U48|1|CA|U|1181
6U48|1|CA|G|1182

Current chains

Chain CA

23S rRNA

Nearby chains

Chain C0

50S ribosomal protein uL30

Chain CS

50S ribosomal protein bL21