HL_6UBU_002
3D structure
- PDB id
- 6UBU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 1.60 A resolution structure of the guanine riboswitch bound to guanine
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 1.6 Å
Loop
- Sequence
- GUUUCUAC
- Length
- 8 nucleotides
- Bulged bases
- 6UBU|1|B|U|48
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6UBU_002 not in the Motif Atlas
- Geometric match to HL_1Y27_002
- Geometric discrepancy: 0.0629
- The information below is about HL_1Y27_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_31585.4
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 20
Unit IDs
6UBU|1|B|G|46
6UBU|1|B|U|47
6UBU|1|B|U|48
6UBU|1|B|U|49
6UBU|1|B|C|50
6UBU|1|B|U|51
6UBU|1|B|A|52
6UBU|1|B|C|53
Current chains
- Chain B
- Guanine riboswitch aptamer domain
Nearby chains
No other chains within 10ÅColoring options: