HL_6UC8_003

3D structure

PDB id

6UC8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Guanine riboswitch bound to 8-aminoguanine

Experimental method

X-RAY DIFFRACTION

Resolution

1.9 Å

Loop

Sequence

ACCGUAAAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6UC8_003 not in the Motif Atlas

Homologous match to HL_3LA5_003

Geometric discrepancy: 0.0705

The information below is about HL_3LA5_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_73266.9

Basepair signature

cWW-F-F-cSW-cSH-F

Number of instances in this motif group

13

Unit IDs

6UC8|1|B|A|59
6UC8|1|B|C|60
6UC8|1|B|C|61
6UC8|1|B|G|62
6UC8|1|B|U|63
6UC8|1|B|A|64
6UC8|1|B|A|65
6UC8|1|B|A|66
6UC8|1|B|U|67

Current chains

Chain B

Guanine riboswitch

Nearby chains