HL_6UCQ_039

3D structure

PDB id

6UCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome recycling complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CGACACAG

Length

8 nucleotides

Bulged bases

6UCQ|1|1A|A|1614, 6UCQ|1|1A|A|1616, 6UCQ|1|1A|A|1618

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6UCQ_039 not in the Motif Atlas

Homologous match to HL_4WF9_038

Geometric discrepancy: 0.1158

The information below is about HL_4WF9_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_28592.3

Basepair signature

cWW-F-F-F

Number of instances in this motif group

13

Unit IDs

6UCQ|1|1A|C|1612
6UCQ|1|1A|G|1613
6UCQ|1|1A|A|1614
6UCQ|1|1A|C|1615
6UCQ|1|1A|A|1616
6UCQ|1|1A|C|1617
6UCQ|1|1A|A|1618
6UCQ|1|1A|G|1619

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 17

50S ribosomal protein L34

Chain 1W

50S ribosomal protein L22