HL_6UCQ_050

3D structure

PDB id

6UCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome recycling complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CCUCCGGG

Length

8 nucleotides

Bulged bases

6UCQ|1|1A|C|2145

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6UCQ_050 not in the Motif Atlas

Geometric match to HL_6CF2_001

Geometric discrepancy: 0.3114

The information below is about HL_6CF2_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_46211.1

Basepair signature

cWW-cWW-tSW-F

Number of instances in this motif group

10

Unit IDs

6UCQ|1|1A|C|2142
6UCQ|1|1A|C|2143
6UCQ|1|1A|U|2144
6UCQ|1|1A|C|2145
6UCQ|1|1A|C|2146
6UCQ|1|1A|G|2147
6UCQ|1|1A|G|2148
6UCQ|1|1A|G|2149

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 1k

30S ribosomal protein S11