HL_6UFJ_002
3D structure
- PDB id
- 6UFJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pistol ribozyme product crystal structure
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.64 Å
Loop
- Sequence
- GCUCAAAGC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6UFJ_002 not in the Motif Atlas
- Geometric match to HL_6UFJ_004
- Geometric discrepancy: 0.0858
- The information below is about HL_6UFJ_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_93383.1
- Basepair signature
- cWW-cSH-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
6UFJ|1|A|G|33
6UFJ|1|A|C|34
6UFJ|1|A|U|35
6UFJ|1|A|C|36
6UFJ|1|A|A|37
6UFJ|1|A|A|38
6UFJ|1|A|A|39
6UFJ|1|A|G|40
6UFJ|1|A|C|41
Current chains
- Chain A
- RNA (50-MER)
Nearby chains
- Chain B
- RNA (5'-R(*UP*CP*UP*GP*CP*UP*CP*UP*CP*(23G))-3')
- Chain E
- RNA (5'-R(*UP*CP*CP*AP*G)-3')
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