Motif HL_93383.1 Version HL_93383.1 of this group appears in releases 3.96 to 3.98
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 1-9 | 8-9 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_6UFJ_004 | 6UFJ | 0.0000 | 0 | C | Pistol ribozyme | G | 33 | C | 34 | U | 35 | C | 36 | A | 37 | A | 38 | A | 39 | G | 40 | C | 41 | cWW | cSH |
| 2 | HL_5K7D_002 | 5K7D | 0.1497 | 0 | A | RNA 47-MER | G | 33 | C | 34 | C | 35 | C | 36 | U | 37 | A | 38 | A | 39 | G | 40 | C | 41 | cWW | cSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCUCAAAGC | 1 |
| GCCCUAAGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUCAAAG | 1 |
| CCCUAAG | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-cSH-F-F-F-F-F-F
- Heat map statistics
- Min 0.15 | Avg 0.07 | Max 0.15
Coloring options: