3D structure

PDB id
6UFM (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cocrystal Structure of the Nocardia farcinica ileS T-box riboswitch in complex with its cognate tRNA
Experimental method
X-RAY DIFFRACTION
Resolution
2.82 Å

Loop

Sequence
GCUGAUAAC
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
tRNA anticodon loop
Broad Annotation
Anticodon loop
Motif group
HL_53597.4
Basepair signature
cWW-F-F-F-F-F-F
Number of instances in this motif group
31

Unit IDs

6UFM|1|A|G|32
6UFM|1|A|C|33
6UFM|1|A|U|34
6UFM|1|A|G|35
6UFM|1|A|A|36
6UFM|1|A|U|37
6UFM|1|A|A|38
6UFM|1|A|A|39
6UFM|1|A|C|40

Current chains

Chain A
RNA (77-MER)

Nearby chains

Chain B
RNA (98-MER)

Coloring options:

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