6UFM Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_6UFM_001 | 1/A/13:23 | tRNA D-loop HL_04642.3 | ||
| HL_6UFM_002 | 1/A/32:40 | tRNA anticodon loop HL_81376.2 | ||
| HL_6UFM_003 | 1/A/54:62 | T-loop with 2 stacked bulged bases HL_33597.2 | ||
| HL_6UFM_004 | 1/B/13:20 | Pseudoknot geometry HL_87306.1 | ||
| HL_6UFM_005 | 1/B/50:55 | Pseudoknot geometry HL_12125.2 | ||
| HL_6UFM_006 | 1/B/80:87 | Pseudoknot HL_17440.1 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_6UFM_001 | 1/B/3:10, 1/B/23:27 | Kink-turn IL_71972.1 | ||
| IL_6UFM_002 | 1/B/34:41, 1/B/64:73 | 10x8 Sarcin-Ricin; G-bulge IL_22278.1 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_6UFM_001 | 1/A/7:10, 1/A/26:28, 1/A/44:50, 1/A/66:67 | tRNA junction J4_95067.1 |
Problematic loops
No problematic loops
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